基于网络药理学的麻杏石甘汤干预新型冠状病毒肺炎作用机制探析

Systematic Pharmacological Strategies to Explore the Regulatory Mechanism of Ma Xing Shi Gan Decoction on COVID-19

  • 摘要:
    目的探析麻杏石甘汤(MXSGD)干预新型冠状病毒肺炎(COVID-19)的作用机制。
    方法基于药代动力学参数通过TCMSP数据库、TCM Database@Taiwan数据库筛选MXSGD的成药性活性成分及其调控的蛋白靶标,随后通过String数据库获得新型冠状病毒转染宿主的(COVID-19)ACE2受体及与之相互作用的相关靶点,利用Cytoscape 3.7.2构建相关网络并进行网络拓扑学分析,对网络中的核心靶点通过DAVID数据库进行基因本体(GO)富集分析和信号通路富集分析。
    结果共收集到272个MXSGD靶点和21个新型冠状病毒(SARS-CoV-2)肺炎的潜在靶点。在此基础上,构建并分析了4个网络:(1)MXSGD成分-靶点网络;(2)MXSGD-SARS-CoV-2蛋白质互作网络;(3)MXSGD-SARS-CoV-2蛋白质互作网络子簇;(4)单味药-信号通路-靶点网络。其核心靶点为AKT1、MAPK3、IL-6、TP53、VEGFA、TNF、CASP3、EGFR、EGF、MAPK1等;GO富集分析显示相关生物模块包括炎症反应(炎性细胞、炎性细胞因子及其信号转导途径)、免疫反应(T细胞、单核细胞、B细胞等免疫细胞)、免疫因子(IFN-γ、TNF-α等)、病毒防御、体液免疫和黏膜固有免疫反应等;信号通路富集显示相关信号通路包括TNF信号通路、NOD样受体信号通路、FoxO信号通路、PI3K-AKT信号通路、Toll样受体信号通路等。
    结论MXSGD可通过多组分、多靶点调控新型冠状病毒性肺炎;它可以通过调节与ACE2相互作用的几种蛋白质和一系列与疾病发展密切相关的信号通路来减轻炎症反应及调节免疫平衡。

     

    Abstract:
    ObjectiveTo use systematic pharmacological strategies to explore the regulatory mechanisms of Ma Xing Shi Gan Decoction (MXSGD) against the coronavirus disease 2019 (COVID-19).
    MethodsData on the compounds and targets of MXSGD were collected from the Traditional Chinese Medicene Systems Parmacology Database and Analysis Platform (TCMSP) and TCM Databases@Taiwan. Data on ACE2-related targets and the protein-protein interaction (PPI) were collected from the String database. The Cytoscape 3.7.2 was used to construct and analyze the networks. The DAVID platform was used for Gene Ontology (GO) and pathway enrichment analyses.
    ResultsData on 272 MXSGD targets and 21 SARS-CoV-2 potential targets were collected. Four networks were constructed and analyzed based on the data: (1) compound-target network of MXSGD; (2) MXSGD-SARS-CoV-2-PPI network; (3) cluster of MXSGD-SARS-CoV-2-PPI network; (4) Herb-Pathway-Target network. The core targets included AKT1, MAPK3, IL-6, TP53, VEGFA, TNF, CASP3, EGFR, EGF and MAPK1. The antiviral biological processes were inflammatory responses (inflammatory cells, inflammatory cytokines and their signaling pathways), immune responses (T cells, monocytes, B cells and other immune cells), immune factors (IFN-γ, TNF-α and so on), virus defense, humoral immunity and mucosal innate immune response. The antivirus-related signaling pathways included TNF, NOD-like receptor, FoxO, PI3K-AKT and Toll-like receptor signaling pathways.
    ConclusionsMXSGD can control disease progression by regulating multiple compounds and targets; it can reduce inflammation and balance immunity by regulating several proteins that interact with ACE2 and signaling pathways closely related to disease development.

     

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