基于网络药理学和分子对接探讨三拗汤治疗慢性咳嗽的活性成分和作用机制

Investigation of the active components and mechanism of Sanao Decoction in treating chronic cough by network pharmacology and molecular docking

  • 摘要:
    目的采用网络药理学和分子对接法探讨三拗汤治疗慢性咳嗽的活性成分和作用机制。
    方法检索TCMSP、BATMAN-TCM数据库和文献以获取三拗汤的活性成分和靶点。运用Cytoscape 3.7.2软件分别构建成分-靶点网络和蛋白质相互作用(PPI)网络,并进行生物信息学分析以获取重要的通路和相应的靶点。最后,通过分子对接计算核心活性成分和靶点的结合能力。
    结果通过网络药理学共筛选得到三拗汤98个活性成分和相应的113个药物靶点,并成功构建成分-靶点网络和PPI网络。生物信息学分析表明,2 281个GO条目富集在慢性咳嗽,其中包括2 062个生物过程条目,77个细胞内成分条目,142个分子功能条目,KEGG富集分析得到20条重要通路。分子对接结果证实了槲皮素、木犀草素、山奈酚和柚皮素和相应的靶点有很好的结合能力。
    结论三拗汤的活性成分,如槲皮素、木犀草素、山奈酚和柚皮素,主要作用于靶点AKT1, MAPK1, RELA, EGFR和Bcl-2,通过调节PI3K-Akt信号通路、AGE-RAGE信号通路和流体剪切应力与动脉粥样硬化通路以发挥抗炎、抗气道重塑、抗氧化应激和修复气道损伤的作用,从而治疗慢性咳嗽。

     

    Abstract:
    ObjectiveTo investigate the active components and mechanism of Sanao Decoction (三拗汤, SAD) in treating chronic cough based on network pharmacology and molecular docking.
    MethodsActive components and their targets were obtained from the Traditional Chinese Medicine Systems and Pharmacology Database and Analysis Platform (TCMSP), Bioinformatics Analysis Tool for Molecular mechANism of Traditional Chinese Medicine (BATMAN-TCM) database, and the literature. The component-target regulatory network and protein-protein interaction (PPI) network were constructed by Cytoscape 3.7.2, and a bioinformatics analysis was performed to identify the significant pathways and their relevant targets. Molecular docking of the core active components and relevant targets was performed.
    ResultsA total of 98 active components of SAD and the corresponding 113 drug targets were identified. The component-target regulatory network and PPI network were successfully established. Results of the bioinformatics analysis indicated that 2 281 Gene Ontology (GO) terms were enriched in chronic cough, including 2 062 terms were in biological processes, 77 in cellular components, and 142 in molecular functions, and top 20 significant pathways in Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Molecular docking study demonstrated that quercetin, luteolin, kaempferol, and naringenin were in good agreement with the corresponding targets.
    ConclusionThe active compounds of SAD, such as quercetin, luteolin, kaempferol, and naringenin, may act on AKT1, MAPK1, RELA, EGFR, and Bcl-2 and regulate the PI3K-Akt signaling pathway, AGE-RAGE signaling pathway, and fluid shear stress and atherosclerosis pathway to exert the effects of anti-inflammatory, anti-airway remodeling, anti-oxidant stress effects, and repair airway damage, thus treating chronic cough.

     

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